Short < 10 days
|
Intermediate 10-21 days
|
Long >21 days
|
Clinical features
|
Suggested investigations
|
Malaria (P. falciparum can have short-intermediate incubation periods.
P. vivax and P. ovale have long incubation periods). |
Fever, malaise, headache, nausea, vomiting, hepatosplenomegaly, anaemia. Refer to the Malaria - ED guideline |
Urgent: Thick/Thin films (x3, 12-24h apart, EDTA); Malaria RDT (EDTA). +/- Malaria PCR (Reference lab). Monitor FBC, LFTs, UEC, Glucose.
|
| Rickettsial infection |
Fever, myalgia, primary inoculation lesion (eschar) ± generalised rash (petechial or macular papular). |
Rickettsia serology (acute & convalescent) +/- PCR on eschar biopsy/blood (discuss with ID/Microbiologist).
|
| Typhoid (Salmonella typhi or Salmonella paratyphi) |
Fever, headache, abdominal pain, altered bowel habit. Rose spots rare in children. |
Blood cultures (multiple sets); Stool M/C/S; +/- Urine culture; Monitor FBC
|
| Campylobacter |
|
|
Fever, diarrhoea, vomiting abdominal pain, bloody stools.
|
Stool M/C/S; +/- Faecal PCR panel.
|
| Chikungunya |
|
|
Arthralgia, myalgia, headache, nausea, rash. |
Chikungunya IgM/IgG serology (from Day 5-7).
|
Dengue
|
|
|
Fever + 2 of -
myalgia, retro-orbital pain, arthralgia, headache, leucopenia, haemorrhagic manifestations
Warning signs: abdominal pain, persistent vomiting, oedema, mucosal bleed, hepatomegaly
|
Dengue serology- IgM, IgG, NS1 Ag (Day 1-7); rapid testing can be requested if urgent.
Monitor FBC for thrombocytopenia, rising haematocrit
|
| Influenza |
|
|
Fever, URTI/LRTI, myalgia. |
Respiratory virus PCR (NPA/throat swab).
|
| Shigella |
|
|
Fever, diarrhoea, vomiting abdominal pain, bloody stools. |
Stool M/C/S; +/- Faecal PCR panel.
|
| |
Leptospirosis |
|
Headache, myalgia, vomiting, rash, abdominal pain, conjunctival suffusion. |
Leptospira serology (MAT - reference lab, acute & convalescent needed).
Leptospira PCR (EDTA/urine.
Monitor FBC, UEC, LFTs, CK.
|
|
Measles
|
|
Cough, coryza, conjunctivitis, rash.
|
Measles PCR (NPA/throat swab, EDTA, urine);
Measles IgM serology (from day 3 of rash).
Notify Public Health.
|
|
Viral Haemorrhagic Fever
|
|
Fever, fatigue, headache, gastrointestinal signs, rash, petechiae, mucosal bleeding.
|
Specific testing requires specialist consultation and high-level containment.
High consequence - notify ID /Microbiology/ Public Health immediately.
|
|
|
Hepatitis A
|
Vomiting, abdominal pain, jaundice.
|
LFTs; Hepatitis A IgM serology. This will be reflexed for PCR if serology is positive.
Stool Hepatitis A PCR.
|
|
|
Hepatitis E |
Vomiting, abdominal pain, jaundice.
|
LFTs; Hepatitis E IgG serology.
|
|
|
Rabies
|
Animal bite: tingling at the site, fever, myalgia, headache, neurological symptoms.
Note – bites are more likely to be infected with animal oral flora than Rabies.
|
Primarily clinical diagnosis in symptomatic patient.
Ante-mortem tests (PCR/FAT on saliva, CSF, skin biopsy) rarely useful/available in time.
Post-exposure prophylaxis is key.
|
| |
|
Tuberculosis |
Fever (low-grade, evening), night sweats, weight loss, fatigue. Pulmonary: prolonged cough (+/- haemoptysis). Extrapulmonary disease depends on site. |
CXR; IGRA or TST; Sputum/Gastric aspirates (AFB smear/culture/PCR). Consider site-specific imaging/biopsy.
Airborne precautions if pulmonary TB is suspected. |